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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6285150_6286983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6285150 - 6286983

Intron Length:

1834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCCTTTTAAAC

Flanking Amino Acid:

LARRRLKRGSGPLPSLVLSW

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

69.2

0.43

65.4

39.1

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

56.1

0.17

1.4

61.22

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003872

6274864 - 6318803

43940