Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_62966485_62974315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62966485 - 62974315

Intron Length:

7831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ACCTACTTACTT

Flanking Amino Acid:

PSKPPLSRVPSQQPLEDLDA

Intron Amino Acid Position:

1790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.1

32.8

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

0.56

0.8

73.9

29.6

Minor 5ss

35.6

-1.6

3.1

50.4

45.6

Minor BPS

51.7

0.13

1.8

66.68

44.5

Associated Gene:

Gene:

WNK1

Ensembl Gene ID:

ENSAPLG00000003146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044101

62884653 - 62987725

103073