Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_62981408_62986922_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62981408 - 62986922

Intron Length:

5515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACGCCCT

5'SS Class:

weak_major

3'SS Sequence:

CTTGTACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GTTTCTTGTACT

Flanking Amino Acid:

KPGGRRTRFLRTSSTNTVGA

Intron Amino Acid Position:

2255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

51.1

45.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

75.5

0.57

0.9

66.7

39.6

Minor 5ss

40.7

-1

3.3

53.8

Minor BPS

61.6

0.45

1.8

81.75

39.4

Associated Gene:

Gene:

WNK1

Ensembl Gene ID:

ENSAPLG00000003146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038719

62884653 - 62987725

103073

ENSAPLT00000044101

62884653 - 62987725

103073