Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_62994361_62994975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62994361 - 62994975

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTAACTTTAATC

Flanking Amino Acid:

VTEVTPSSKQATAHPPGKQD

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.3

0.62

0.9

69.5

41.3

Minor 5ss

39.2

-1.2

3.1

48.2

47.4

Minor BPS

0.48

1.3

67.58

38.4

Associated Gene:

Gene:

RAD52

Ensembl Gene ID:

ENSAPLG00000006671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030791

62993148 - 63005888

12741

ENSAPLT00000006935

62993148 - 63005888

12741