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Intron Name: Anas_platyrhynchos_platyrhynchos_1_63094122_63102007_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
63094122 - 63102007

Intron Length:
7886

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAATGG

5'SS Class:
major

3'SS Sequence:
TGTTTGAATCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
TATGTTTGAATC

Flanking Amino Acid:
EQRAAILQTEVDALRLRLEE

Intron Amino Acid Position:
524

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
65.8
40.9

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
68.2
0.41
1
60.1
45.1

Minor 5ss
36.7
-1.5
3.1
47.6
47.9

Minor BPS
54.3
0.11
1.5
63.44
36.5

Associated Gene:

Gene:
ERC1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63017236 - 63200575
183340

63017236 - 63200575
183340