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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6330985_6332199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6330985 - 6332199

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TCCTCTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AAAATGTTAACG

Flanking Amino Acid:

QQLEDKELVGGNKKYFKRSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.4

45.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

82.1

0.72

0.7

80.7

24.6

Minor 5ss

28.5

-2.5

3.3

30.2

42.9

Minor BPS

47.5

-0.3

2.1

52.42

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046945

6330642 - 6347588

16947

ENSAPLT00000041047

6330642 - 6347588

16947