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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6332278_6335051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6332278 - 6335051

Intron Length:

2774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

CTGTTAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTATTAGTAACT

Flanking Amino Acid:

EAYFQRCGYKVQQQEEEEKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.6

35.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

65.6

0.35

60.3

39.6

Minor 5ss

43.2

-0.7

3.1

58.4

46.5

Minor BPS

55.3

0.24

2.2

81.66

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041047

6330642 - 6347588

16947

ENSAPLT00000003486

6321811 - 6347588

25778