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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6339906_6340855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6339906 - 6340855

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

TGTGACACAAAT

Flanking Amino Acid:

DMDIITKFLKFLLGVWAKEL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

57.1

0.18

62.9

30.6

Major PPT

73.8

0.54

68.4

37.3

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

43.4

-0.4

2.1

64.91

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046945

6330642 - 6347588

16947

ENSAPLT00000041047

6330642 - 6347588

16947

ENSAPLT00000003486

6321811 - 6347588

25778