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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6341542_6343746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6341542 - 6343746

Intron Length:

2205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTTGCTAAGT

Flanking Amino Acid:

KFMLQREYVKANDAYLQMAI

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.8

0.76

0.8

81.3

36.4

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

46.5

-0.1

2.5

74.35

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003486

6321811 - 6347588

25778

ENSAPLT00000046945

6330642 - 6347588

16947

ENSAPLT00000041047

6330642 - 6347588

16947