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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6343903_6346769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6343903 - 6346769

Intron Length:

2867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGATTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATTACAGAATT

Flanking Amino Acid:

NDETQRKYIQGLKRLMTICQ

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

34.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.2

0.57

44.4

Minor 5ss

32.9

-2

3.6

46.7

48.6

Minor BPS

52.4

0.15

1.9

76.72

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003486

6321811 - 6347588

25778

ENSAPLT00000046945

6330642 - 6347588

16947

ENSAPLT00000041047

6330642 - 6347588

16947