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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6370285_6376806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6370285 - 6376806

Intron Length:

6522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTGTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TAATTACTAACT

Flanking Amino Acid:

QFYLDRKQSKSKIHAARSLS

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

73.9

0.54

65.5

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

54.4

0.22

1.9

76.21

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032618

6369123 - 6526339

157217