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Intron Name: Anas_platyrhynchos_platyrhynchos_1_63891403_63910767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63891403 - 63910767

Intron Length:

19365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTGCTAATAAGT

Flanking Amino Acid:

RPLRLVSGVPSLQVVLNSII

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.9

31.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

83.2

0.75

0.8

77.4

31.3

Minor 5ss

37.9

-1.4

2.7

47.4

36.1

Minor BPS

45.2

-0.2

2.1

67.19

43.2

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044963

63652284 - 64080502

428219

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219

ENSAPLT00000004870

63652284 - 64080502

428219