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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6395408_6401648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6395408 - 6401648

Intron Length:

6241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACGTAT

5'SS Class:

major

3'SS Sequence:

TCTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTGCCTTTAAAT

Flanking Amino Acid:

ALKEHPSLAYCEDRVIEHYK

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

68.3

39.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

88.4

0.86

0.7

80.6

31.4

Minor 5ss

44.1

-0.6

3.3

60.9

46.1

Minor BPS

0.52

1.5

74.41

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032618

6369123 - 6526339

157217