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Intron Name: Anas_platyrhynchos_platyrhynchos_1_63966146_63974683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63966146 - 63974683

Intron Length:

8538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTATCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAAACTTTAATG

Flanking Amino Acid:

IEGENCGARLAHRISKSKFS

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

67.6

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.2

0.93

0.7

89.2

27.3

Minor 5ss

31.5

-2.1

2.6

30.3

35.2

Minor BPS

59.6

0.16

1.4

56.75

38.7

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004870

63652284 - 64080502

428219

ENSAPLT00000044963

63652284 - 64080502

428219

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219