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Intron Name: Anas_platyrhynchos_platyrhynchos_1_639948_640993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

639948 - 640993

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ATTCATGTAAAG

Flanking Amino Acid:

KLELSYNKINDLSCVSQMPY

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

78.5

0.64

0.8

77.1

37.1

Minor 5ss

43.7

-0.7

2.6

56.9

42.5

Minor BPS

43.6

-0.6

2.2

53.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025468

637786 - 641112

3327