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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64006195_64006628_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64006195 - 64006628

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAGA

5'SS Class:

major

3'SS Sequence:

CTTCCGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTGTTCCTATCT

Flanking Amino Acid:

RAINRAKGLKHVVQCVFVAI

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

72.9

38.1

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

82.2

0.72

0.8

76.1

32.4

Minor 5ss

29.2

-2.4

2.6

32.8

41.5

Minor BPS

57.4

0.31

80.12

41.9

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219

ENSAPLT00000004870

63652284 - 64080502

428219

ENSAPLT00000044963

63652284 - 64080502

428219