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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64007729_64008507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64007729 - 64008507

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TGTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTTCTCTGCATT

Flanking Amino Acid:

FTVSTFEGWPELLYRSIDSH

Intron Amino Acid Position:

1120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

68.6

36.4

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

84.3

0.77

0.9

81.2

36.5

Minor 5ss

31.2

-2.2

3.2

38.1

40.6

Minor BPS

52.7

0.17

1.9

77.82

38.8

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219

ENSAPLT00000004870

63652284 - 64080502

428219

ENSAPLT00000044963

63652284 - 64080502

428219