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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6401733_6408194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6401733 - 6408194

Intron Length:

6462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AACTCTCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCCTTTTGAACT

Flanking Amino Acid:

ILQEAKGDFSSNEVVRNELK

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.6

0.62

0.9

73.8

35.8

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

0.52

1.4

75.64

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032618

6369123 - 6526339

157217