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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64049207_64052154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64049207 - 64052154

Intron Length:

2948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CAATGGCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GCTGTTGTAACT

Flanking Amino Acid:

AEHTQCSSSMNAEENSRISI

Intron Amino Acid Position:

1317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

38.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

65.9

0.36

54.3

45.3

Minor 5ss

32.4

-2

37.8

40.6

Minor BPS

48.5

-0

2.1

67.13

44.4

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004870

63652284 - 64080502

428219

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219