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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64070595_64071493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64070595 - 64071493

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCGAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCGAA

U12 Branch Point Sequence:

CTTCCTCGAATT

Flanking Amino Acid:

QEAPWKLPSKRTHYYETLGR

Intron Amino Acid Position:

1821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

45.9

-0.2

1.2

41.7

Major PPT

63.2

0.3

63.4

37.2

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

49.4

0.04

1.8

70.92

40.3

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044963

63652284 - 64080502

428219

ENSAPLT00000035215

63652284 - 64080502

428219