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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64070595_64073510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64070595 - 64073510

Intron Length:

2916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAGAA

U12 Branch Point Sequence:

TTTTCTAGAATC

Flanking Amino Acid:

QEAPWKLPSKRLSYQDDENR

Intron Amino Acid Position:

1821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

57.4

0.18

1.1

54.9

40.8

Major PPT

85.3

0.79

0.7

79.9

25.4

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

60.9

0.32

1.7

76.19

33.8

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004870

63652284 - 64080502

428219