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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64071521_64072901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64071521 - 64072901

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTCATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTATTTTGACT

Flanking Amino Acid:

KRTHYYETLGRSSSRDSQLA

Intron Amino Acid Position:

1830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

78.3

36.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

75.6

0.58

0.9

75.5

34.3

Minor 5ss

45.2

-0.5

3.2

44.2

Minor BPS

67.1

0.62

1.2

79.98

35.8

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000044963

63652284 - 64080502

428219