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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64073621_64075398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64073621 - 64075398

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TTTGGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

AAGTGATGGACA

Flanking Amino Acid:

KKGFLCSSALGRRASFHLEC

Intron Amino Acid Position:

1858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.4

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

0.83

0.8

84.6

Minor 5ss

38.1

-1.3

3.2

51.4

45.3

Minor BPS

42.5

-0.6

2.1

51.43

39.8

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219

ENSAPLT00000004870

63652284 - 64080502

428219

ENSAPLT00000044963

63652284 - 64080502

428219