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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64075503_64077958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64075503 - 64077958

Intron Length:

2456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CGTCCCTCACTC

Flanking Amino Acid:

VLPLHLVHHQALAVAGLSPL

Intron Amino Acid Position:

1893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

71.1

0.48

0.9

64.6

36.5

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

47.6

-0.2

1.8

56.76

Associated Gene:

Gene:

CACNA1C

Ensembl Gene ID:

ENSAPLG00000004725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044963

63652284 - 64080502

428219

ENSAPLT00000035215

63652284 - 64080502

428219

ENSAPLT00000019043

63652284 - 64080502

428219

ENSAPLT00000004870

63652284 - 64080502

428219