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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64096873_64097990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64096873 - 64097990

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTACC

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CATCTGTTAACT

Flanking Amino Acid:

CKMITREVTEGELPSQANVT

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.7

31.5

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

78.8

0.65

0.9

73.1

37.2

Minor 5ss

37.1

-1.5

2.6

47.1

41.2

Minor BPS

55.4

0.25

2.1

74.02

42.7

Associated Gene:

Gene:

IL17RA

Ensembl Gene ID:

ENSAPLG00000012503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013043

64089233 - 64102800

13568

ENSAPLT00000013040

64089345 - 64102800

13456

ENSAPLT00000013034

64085379 - 64102800

17422