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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64098069_64098504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64098069 - 64098504

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATTTTGACT

Flanking Amino Acid:

LRACCKYEVQIQPFFANCGT

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.1

38.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

77.9

0.63

0.9

71.3

38.9

Minor 5ss

-1.4

3.6

56.2

48.2

Minor BPS

0.81

1.2

87.15

31.9

Associated Gene:

Gene:

IL17RA

Ensembl Gene ID:

ENSAPLG00000012503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013043

64089233 - 64102800

13568

ENSAPLT00000013040

64089345 - 64102800

13456

ENSAPLT00000013034

64085379 - 64102800

17422