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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64100765_64101310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64100765 - 64101310

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TGTCTCTCACCA

Flanking Amino Acid:

RKCSHNDLQTVPSTDLPLPP

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

74.2

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

74.1

0.54

0.9

67.1

39.2

Minor 5ss

39.8

-1.1

3.1

53.4

45.6

Minor BPS

49.9

-0

1.8

65.67

40.5

Associated Gene:

Gene:

IL17RA

Ensembl Gene ID:

ENSAPLG00000012503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013043

64089233 - 64102800

13568

ENSAPLT00000013040

64089345 - 64102800

13456

ENSAPLT00000013034

64085379 - 64102800

17422