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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64123534_64124101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64123534 - 64124101

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGACCTTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTGACCTTATCC

Flanking Amino Acid:

NSPIRRLYAIGDNPMSDIYG

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.5

35.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.8

0.47

62.3

43.3

Minor 5ss

30.3

-2.3

3.3

33.4

Minor BPS

61.1

0.33

1.7

68.1

43.1

Associated Gene:

Gene:

HDHD5

Ensembl Gene ID:

ENSAPLG00000012533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013052

64123177 - 64127790

4614