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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64124291_64124609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64124291 - 64124609

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CTTTCTGGAGCA

Flanking Amino Acid:

LLWMAEAKMPRFGHGTFLLC

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

71.2

0.53

37.5

Major PPT

0.43

1.1

65.9

39.6

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

45.6

-0.3

2.3

63.68

43.1

Associated Gene:

Gene:

HDHD5

Ensembl Gene ID:

ENSAPLG00000012533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013052

64123177 - 64127790

4614