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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64125204_64125692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64125204 - 64125692

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATCTCT

5'SS Class:

major

3'SS Sequence:

TATTTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTCTTTTTATTT

Flanking Amino Acid:

VDQSRRPKELPPPTTGFPTI

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.8

0.74

0.9

80.9

36.4

Minor 5ss

46.7

-0.3

2.8

63.1

43.4

Minor BPS

57.7

0.32

1.6

71.36

40.7

Associated Gene:

Gene:

HDHD5

Ensembl Gene ID:

ENSAPLG00000012533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013052

64123177 - 64127790

4614