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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64125787_64127194_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

64125787 - 64127194

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TGAACTGAAATAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

GATTCCTTGATG

Flanking Amino Acid:

GQGPVEENAHNLGFKNVVTI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

65.1

41.6

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

49.8

-0

1.1

44.1

41.2

Minor 5ss

95.8

1.54

0.7

90.3

20.6

Minor BPS

71.3

0.52

1.3

68.31

39.3

Associated Gene:

Gene:

HDHD5

Ensembl Gene ID:

ENSAPLG00000012533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013052

64123177 - 64127790

4614