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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64127308_64127389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64127308 - 64127389

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGGCAG

U12 Branch Point Sequence:

CCCCCGGCAGCC

Flanking Amino Acid:

RELAQALGLQVSPEQVILSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

34.6

-0.9

1.5

34.4

42.4

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

30.5

-1.5

2.4

35.11

41.4

Associated Gene:

Gene:

HDHD5

Ensembl Gene ID:

ENSAPLG00000012533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013052

64123177 - 64127790

4614