About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64139531_64139860_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
64139531 - 64139860
Intron Length:
330

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAACTGGA
5'SS Class:
major
3'SS Sequence:
GTCTCCTCCCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCAAAA
U12 Branch Point Sequence:
TTGTTCAAAAAT
Flanking Amino Acid:
FPDTLAGFDLVGNEDEGHSL
Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.3
0.55
1.2
65.1
41.1
Major BPS
68.1
0.45
1
73.5
28.6
Major PPT
74.2
0.55
0.8
65.5
36.1
Minor 5ss
37.7
-1.4
3.2
46.7
43.9
Minor BPS
49.1
0.01
2
73.6
43.1

Associated Gene:

Gene:
ADA2
Ensembl Gene ID:
ENSAPLG00000012586
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013137
64136426 - 64149081
12656