Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64139952_64141031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64139952 - 64141031

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGCT

5'SS Class:

major

3'SS Sequence:

TCTTGCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

AGCCTCTGCACT

Flanking Amino Acid:

LGAKIIFTVHRMLNVSQIKE

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

65.5

37.3

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

79.9

0.67

0.8

77.7

31.1

Minor 5ss

29.8

-2.3

3.9

47.1

48.5

Minor BPS

-0.2

1.9

61.14

42.3

Associated Gene:

Gene:

ADA2

Ensembl Gene ID:

ENSAPLG00000012586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013137

64136426 - 64149081

12656