Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64222462_64222936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64222462 - 64222936

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

TGCTGTTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

AGATATTTCATG

Flanking Amino Acid:

AKTNGELAPDRGCGGQANTP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.9

37.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.5

0.62

0.9

72.1

37.9

Minor 5ss

37.2

-1.4

3.4

51.6

45.1

Minor BPS

-0.5

1.9

48.16

39.4

Associated Gene:

Gene:

CECR2

Ensembl Gene ID:

ENSAPLG00000012627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027953

64222406 - 64241613

19208

ENSAPLT00000013186

64200611 - 64241613

41003

ENSAPLT00000044383

64198256 - 64241613

43358