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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64227122_64231901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64227122 - 64231901

Intron Length:

4780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGTTTTGTCACA

Flanking Amino Acid:

HQPIKPIKQEVNPNVLSSME

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

73.9

0.59

30.2

Major PPT

80.9

0.7

0.9

75.8

38.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

47.3

-0.2

2.3

66.82

40.3

Associated Gene:

Gene:

CECR2

Ensembl Gene ID:

ENSAPLG00000012627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044383

64198256 - 64241613

43358

ENSAPLT00000013186

64200611 - 64241613

41003