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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64239105_64240321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64239105 - 64240321

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CCTTCCTGCACC

Flanking Amino Acid:

PSPVPHPGQMRPAVPGTFGP

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

66.8

0.38

0.8

33.1

Minor 5ss

34.1

-1.8

3.3

45.5

44.6

Minor BPS

55.5

0.16

66.78

44.8

Associated Gene:

Gene:

CECR2

Ensembl Gene ID:

ENSAPLG00000012627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044383

64198256 - 64241613

43358

ENSAPLT00000027953

64222406 - 64241613

19208

ENSAPLT00000013186

64200611 - 64241613

41003