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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64268661_64269052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64268661 - 64269052

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TCAATGTTAATT

Flanking Amino Acid:

CRKQDLPMVKAAIQKSIPIY

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

0.72

80.3

31.7

Major PPT

72.5

0.51

0.9

65.1

41.2

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

50.2

0.08

2.1

68.64

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013260

64266962 - 64277273

10312