Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64290120_64293295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64290120 - 64293295

Intron Length:

3176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTAACTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTGATTTAACT

Flanking Amino Acid:

LHKALEILLSKPVTYQEYRE

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.5

0.66

0.9

73.8

36.5

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

66.3

0.59

1.6

81.57

39.9

Associated Gene:

Gene:

BCL2L13

Ensembl Gene ID:

ENSAPLG00000008978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009330

64278833 - 64312872

34040