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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64321367_64322632_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
64321367 - 64322632

Intron Length:
1266

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTTTC

5'SS Class:
major

3'SS Sequence:
CCTTCATGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTCAT

U12 Branch Point Sequence:
GATTCCTTCATG

Flanking Amino Acid:
MEQDIHSGRFNQM

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.2
74.3
37.2

Major BPS
75
0.62
1.1
77.2
36

Major PPT
71.4
0.48
0.9
69.6
35.7

Minor 5ss
39.7
-1.2
3
52.8
44.4

Minor BPS
61.5
0.22
1.8
65.35
42.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

64318200 - 64322641
4442