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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64361116_64364766_R


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
64361116 - 64364766

Intron Length:
3651

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGCAGG

5'SS Class:
major

3'SS Sequence:
TCCCCCTTTAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTCCTTTACC

Flanking Amino Acid:
ERSSQKSKRESIYVPHALAF

Intron Amino Acid Position:
1993

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1.1
63.6
48.1

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
69.9
0.45
1
69.8
28.4

Minor 5ss
37.4
-1.4
3.1
48.3
47.5

Minor BPS
83.2
1.03
1.4
91.21
28.8

Associated Gene:

Gene:
MICAL3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

64339344 - 64441559
102216