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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64369843_64370480_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64369843 - 64370480

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGGTAC

5'SS Class:

major

3'SS Sequence:

AATTAATGATCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

GTGTAATTAATG

Flanking Amino Acid:

EGDTGAELDDDDIPSDAEAE

Intron Amino Acid Position:

1150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

61.3

40.3

Major BPS

0.82

0.8

24.9

Major PPT

59.6

0.22

1.1

56.9

46.6

Minor 5ss

36.1

-1.6

3.5

49.5

47.1

Minor BPS

51.2

-0.1

1.9

58.52

Associated Gene:

Gene:

MICAL3

Ensembl Gene ID:

ENSAPLG00000007993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020396

64339344 - 64441559

102216

ENSAPLT00000032344

64339344 - 64437147

97804

ENSAPLT00000017265

64339344 - 64435003

95660

ENSAPLT00000024725

64339344 - 64435003

95660

ENSAPLT00000036272

64339344 - 64435003

95660

ENSAPLT00000008358

64339344 - 64441559

102216

ENSAPLT00000024635

64339344 - 64441559

102216

ENSAPLT00000023040

64339344 - 64441559

102216

ENSAPLT00000034421

64339344 - 64441559

102216