Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64409488_64411844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64409488 - 64411844

Intron Length:

2357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCATTA

5'SS Class:

major

3'SS Sequence:

CTCCATCTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTTGTTTCATT

Flanking Amino Acid:

SSPSSDSLRQKYIKMYTGGV

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

68.7

39.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

64.9

0.34

61.4

34.7

Minor 5ss

45.7

-0.5

3.2

64.6

46.8

Minor BPS

57.4

0.31

2.2

82.98

39.3

Associated Gene:

Gene:

MICAL3

Ensembl Gene ID:

ENSAPLG00000007993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023040

64339344 - 64441559

102216

ENSAPLT00000017265

64339344 - 64435003

95660

ENSAPLT00000036272

64339344 - 64435003

95660

ENSAPLT00000034421

64339344 - 64441559

102216

ENSAPLT00000024635

64339344 - 64441559

102216