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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64427192_64428510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64427192 - 64428510

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

GCTTGATTCAGT

Flanking Amino Acid:

AIIHRYRPDLIDFDSLDEHN

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

81.9

0.72

0.8

76.4

32.2

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

41.3

-0.6

2.5

61.23

48.2

Associated Gene:

Gene:

MICAL3

Ensembl Gene ID:

ENSAPLG00000007993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020396

64339344 - 64441559

102216

ENSAPLT00000032344

64339344 - 64437147

97804

ENSAPLT00000017265

64339344 - 64435003

95660

ENSAPLT00000024725

64339344 - 64435003

95660

ENSAPLT00000036272

64339344 - 64435003

95660

ENSAPLT00000008358

64339344 - 64441559

102216

ENSAPLT00000024635

64339344 - 64441559

102216

ENSAPLT00000023040

64339344 - 64441559

102216

ENSAPLT00000034421

64339344 - 64441559

102216