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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64581635_64582102_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64581635 - 64582102

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

ATTTGTTCAAAG

Flanking Amino Acid:

TPQRIVENFKVFDFELTKEE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

0.65

1.5

85.7

34.9

Major PPT

76.6

0.6

0.9

77.7

36.7

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

47.8

-0.3

2.1

59.22

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032884

64580772 - 64600766

19995

ENSAPLT00000006530

64580772 - 64598266

17495