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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6460271_6526246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6460271 - 6526246

Intron Length:

65976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCGT

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAA

U12 Branch Point Sequence:

GTGCCTTGAACA

Flanking Amino Acid:

GSLRRRSVERMTEGRRCQVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

62.3

0.31

1.1

54.9

40.8

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

39.2

-1.2

3.1

48.4

47.2

Minor BPS

60.1

0.31

1.5

66.7

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032618

6369123 - 6526339

157217