Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_64634370_64641673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64634370 - 64641673

Intron Length:

7304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTAGCTGTAACT

Flanking Amino Acid:

SSRALLKHVEGISDEDIINV

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

81.9

0.72

0.9

80.1

31.9

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

51.5

0.13

2.1

71.91

45.4

Associated Gene:

Gene:

BPGM

Ensembl Gene ID:

ENSAPLG00000006230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006451

64633706 - 64641885

8180