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Intron Name: Anas_platyrhynchos_platyrhynchos_1_64897485_64897544_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64897485 - 64897544

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AA

5'SS Sequence:

AAA|GCACCCAAG

5'SS Class:

weak_major

3'SS Sequence:

TCCTGAACAAAAA|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

AGTTCCTGAACA

Flanking Amino Acid:

QVKDDKDKEKAQNGERELTS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.3

49.3

47.1

Major BPS

69.6

0.49

59.5

Major PPT

32.7

-1

3.1

42.6

35.4

Minor 5ss

34.6

-1.8

4.1

47.5

42.8

Minor BPS

75.2

0.79

1.4

80.19

34.8

Associated Gene:

Gene:

CALD1

Ensembl Gene ID:

ENSAPLG00000015139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028994

64865122 - 64919163

54042

ENSAPLT00000027581

64826678 - 64919163

92486