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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65358368_65360353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65358368 - 65360353

Intron Length:

1986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTTGTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

ATGTCAGTAAAA

Flanking Amino Acid:

SDYINANYIPGYNSPQEYIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.3

39.4

Major BPS

55.5

0.14

1.4

40.9

Major PPT

81.3

0.7

0.8

80.5

31.5

Minor 5ss

32.5

-2

2.8

43.3

43.8

Minor BPS

47.3

-0.2

2.3

64.37

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013574

65346597 - 65366028

19432