Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_65382828_65383260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65382828 - 65383260

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

CTTGTGACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTCTGCTTATTT

Flanking Amino Acid:

AWLESKGFNPVTVNSLGVLT

Intron Amino Acid Position:

748

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.7

40.8

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

70.2

0.45

0.9

66.4

39.5

Minor 5ss

45.8

-0.4

2.8

59.1

45.3

Minor BPS

58.9

0.36

79.24

43.6

Associated Gene:

Gene:

EPS8

Ensembl Gene ID:

ENSAPLG00000012030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019116

65377447 - 65508536

131090

ENSAPLT00000012563

65377447 - 65508536

131090